AX-89838421, AX-89838421 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89838421
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88873726
TypeSNP
SNP AllelesA/G
Probe 1AX-89838421.AX-89838421: GAAGGAGTCGAGTCACAACAAGAAGTGGCA
5' Flanking SequenceAGCAACTTCCTCAGCTCAGTGTTGTTCTTCACCGT
3' Flanking SequenceGTCAGCTCAAGATCATAAACATCATAGTTCATGAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A90.84AX-89838421View
Sequence
>AX-89838421 ID=AX-89838421; Name=AX-89838421; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCAACTTCCTCAGCTCAGTGTTGTTCTTCACCGTRGTCAGCTCAAGATC
ATAAACATCATAGTTCATGAG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:36059424..36059494+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:36049871..36049941+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:36047166..36047236+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:11020..11090- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:2583398..2583468- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:2586257..2586320- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:30043036..30043106- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3121344..3121414- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3123940..3124010- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:1842323..1842323. Fragaria vesca Whole Genome v1.1 Assembly & Annotation