AX-89796190, AX-89796190 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89796190
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88873751
TypeSNP
SNP AllelesT/C
Probe 1AX-89796190.AX-89796190: CATTAGTTCAAGTAGGTTGGCATGCGTCGT
5' Flanking SequenceTTATTGTAATCAAGTTCATCCAACCGTACGCAGCA
3' Flanking SequenceAAAATATGCTCGGGCAATTCTTCTGCCTTGTTTCC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A90.84AX-89796190View
Sequence
>AX-89796190 ID=AX-89796190; Name=AX-89796190; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTATTGTAATCAAGTTCATCCAACCGTACGCAGCAYAAAATATGCTCGGG
CAATTCTTCTGCCTTGTTTCC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:36093704..36093774+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:92895..92965+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:2540975..2541045- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:30013679..30013749- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3086455..3086525- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:1876603..1876603. Fragaria vesca Whole Genome v1.1 Assembly & Annotation