AX-89895729, AX-89895729 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89895729
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88873784
TypeSNP
SNP AllelesT/G
Probe 1AX-89895729.AX-89895729: AATTTTTGTTAGTTGTAGGCTCATCTCTCA
5' Flanking SequenceGATGACTCTCGGGTTCCTTGGAGCTGTAGGTGATG
3' Flanking SequenceACTCTCTACTCGGATGTTGATTGTTTTTAATAGTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A92.42AX-89895729View
Sequence
>AX-89895729 ID=AX-89895729; Name=AX-89895729; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GATGACTCTCGGGTTCCTTGGAGCTGTAGGTGATGKACTCTCTACTCGGA
TGTTGATTGTTTTTAATAGTG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:36130500..36130570+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:123257..123327+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:29977790..29977860- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3048078..3048148- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:1913399..1913399. Fragaria vesca Whole Genome v1.1 Assembly & Annotation