AX-89841927, AX-89841927 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89841927
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88875013
TypeSNP
SNP AllelesT/C
Probe 1AX-89841927.AX-89841927: GCACCAATTTAGGATAAACCAAAGAAGTCG
5' Flanking SequenceATTACCGTGGTTAAATCCTATTTGGTTTCTTCAGC
3' Flanking SequenceCCTGCAATAGAAATGGGGTGTGCTGTTGGTGAACG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A33.7AX-89841927View
Sequence
>AX-89841927 ID=AX-89841927; Name=AX-89841927; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTACCGTGGTTAAATCCTATTTGGTTTCTTCAGCYCCTGCAATAGAAAT
GGGGTGTGCTGTTGGTGAACG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:9364018..9364088- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:32415483..32415553+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:18229913..18229983+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:10602892..10602962- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:26088034..26088104- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:4243923..4243923. Fragaria vesca Whole Genome v1.1 Assembly & Annotation