AX-89799392, AX-89799392 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799392
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88875565
TypeSNP
SNP AllelesA/G
Probe 1AX-89799392.AX-89799392: GGTTCTTATCTCAATAAGACTAGCATAAGT
5' Flanking SequenceCTTCTCCAAGAATAGAGTTATTCTGATCGTATTCA
3' Flanking SequenceTTCACGTTGTAGACTTGGGTCAGCTACCTTATGCT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A24.85AX-89799392View
Sequence
>AX-89799392 ID=AX-89799392; Name=AX-89799392; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTTCTCCAAGAATAGAGTTATTCTGATCGTATTCARTTCACGTTGTAGAC
TTGGGTCAGCTACCTTATGCT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:8190635..8190705- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:8872302..8872350+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:33446804..33446874+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:33422482..33422552+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:27111692..27111762+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:33347937..33348007- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:21997014..21997068- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:5417306..5417306. Fragaria vesca Whole Genome v1.1 Assembly & Annotation