AX-89899461, AX-89899461 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89899461
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88875769
TypeSNP
SNP AllelesA/G
Probe 1AX-89899461.AX-89899461: TGATTTTAACTCTAGTTTAGGTATTTTTAG
5' Flanking SequenceTCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGT
3' Flanking SequenceGATTTTTATGGATTTGATCTCAATTTTAGTGAACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A24.85AX-89899461View
Sequence
>AX-89899461 ID=AX-89899461; Name=AX-89899461; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGTRGATTTTTATGGATT
TGATCTCAATTTTAGTGAACA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:7830815..7830885- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:7804706..7804771- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:9482378..9482448+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:33912625..33912695+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:19786692..19786762+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:19806857..19806922+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:27499005..27499075+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:5777126..5777126. Fragaria vesca Whole Genome v1.1 Assembly & Annotation