AX-89842312, AX-89842312 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89842312
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876063
TypeSNP
SNP AllelesT/G
Probe 1AX-89842312.AX-89842312: ACAGTGTAAACAATACGGTTGGTGTCGAGA
5' Flanking SequenceAACAATGTCACATTTGTTATGCCAACCACAGCTCT
3' Flanking SequenceCTTCAAGCACATTTCTTCAAAACCAAAGGGGTTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A24.85AX-89842312View
Sequence
>AX-89842312 ID=AX-89842312; Name=AX-89842312; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AACAATGTCACATTTGTTATGCCAACCACAGCTCTKCTTCAAGCACATTT
CTTCAAAACCAAAGGGGTTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:7178045..7178115- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:34516645..34516715+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:20364538..20364608+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:29161331..29161401+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:28169236..28169306+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:6429896..6429896. Fragaria vesca Whole Genome v1.1 Assembly & Annotation