AX-89799718, AX-89799718 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799718
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876564
TypeSNP
SNP AllelesT/G
Probe 1AX-89799718.AX-89799718: TCGTCTTCGAAATTCACTATGTTTCGACTA
5' Flanking SequenceGTTAAAGCAGAAGCTTTAAGTGATACAAAGCTGAT
3' Flanking SequenceATGAAGCCGGTTACCACAGGAGCACATAGCTTGGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A21.81AX-89799718View
Sequence
>AX-89799718 ID=AX-89799718; Name=AX-89799718; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTTAAAGCAGAAGCTTTAAGTGATACAAAGCTGATKATGAAGCCGGTTAC
CACAGGAGCACATAGCTTGGA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:6306846..6306916- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:35544745..35544815+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:21446747..21446817+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:30075104..30075174+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:7485751..7485823- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:43364675..43364745- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:7301095..7301095. Fragaria vesca Whole Genome v1.1 Assembly & Annotation