AX-89799727, AX-89799727 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799727
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876584
TypeSNP
SNP AllelesA/C
Probe 1AX-89799727.AX-89799727: TTAGTTGTCCATTTCTTGTTCATGCTCTTC
5' Flanking SequenceCACAAAATCAACAGGTAAAGAACAAGTACGAGAAG
3' Flanking SequenceACAGCGGTCCAAGGTGGAAATGAGACGCTGCAAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A21.81AX-89799727View
Sequence
>AX-89799727 ID=AX-89799727; Name=AX-89799727; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CACAAAATCAACAGGTAAAGAACAAGTACGAGAAGMACAGCGGTCCAAGG
TGGAAATGAGACGCTGCAAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:6262323..6262393- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:35640692..35640762+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:21490293..21490363+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:30117078..30117148+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:7422926..7422996- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:43266000..43266070- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:7345618..7345618. Fragaria vesca Whole Genome v1.1 Assembly & Annotation