AX-89799739, AX-89799739 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799739
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876609
TypeSNP
SNP AllelesA/G
Probe 1AX-89799739.AX-89799739: CGTAGTCCGAATGACTATAATTACTACTTC
5' Flanking SequenceTTCAAGCATCAGGCTTACTGATATTAATGATGAAG
3' Flanking SequenceGATATCTAGTGACAAATGTATTGAAGTATGGTTTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A21.81AX-89799739View
Sequence
>AX-89799739 ID=AX-89799739; Name=AX-89799739; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTCAAGCATCAGGCTTACTGATATTAATGATGAAGRGATATCTAGTGACA
AATGTATTGAAGTATGGTTTC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:6222504..6222574- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:35690630..35690700+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:21538870..21538940+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:30156648..30156718+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:7385344..7385414- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:43233291..43233361- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:7385437..7385437. Fragaria vesca Whole Genome v1.1 Assembly & Annotation