AX-89799778, AX-89799778 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799778
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876729
TypeSNP
SNP AllelesA/G
Probe 1AX-89799778.AX-89799778: ACTCTAGTCTGTTTCCCAATCTTCAAAGTC
5' Flanking SequenceCCCACTGAGATCAGACAAAGGGTTAGAAGTTTCAG
3' Flanking SequenceATTTCCAGTTATGCTAATTGGCATCCGATAACCAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A20.8AX-89799778View
Sequence
>AX-89799778 ID=AX-89799778; Name=AX-89799778; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCCACTGAGATCAGACAAAGGGTTAGAAGTTTCAGRATTTCCAGTTATGC
TAATTGGCATCCGATAACCAG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:6003029..6003099- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:36006865..36006935+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:21737554..21737624+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:30418325..30418395+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:7014150..7014220- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:42960452..42960521- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:7604912..7604912. Fragaria vesca Whole Genome v1.1 Assembly & Annotation