AX-89899860, AX-89899860 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89899860
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88876759
TypeSNP
SNP AllelesT/C
Probe 1AX-89899860.AX-89899860: AGGAATCCCTGCTGTGCAAATTATATTTAT
5' Flanking SequenceAGTATTGAAGTGCAAGAAGAAAAAGTCTGAGCAGA
3' Flanking SequenceTATTTATATTAAACGTGTCGTCCCTAAGGAGCAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A20.8AX-89899860View
Sequence
>AX-89899860 ID=AX-89899860; Name=AX-89899860; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGTATTGAAGTGCAAGAAGAAAAAGTCTGAGCAGAYTATTTATATTAAAC
GTGTCGTCCCTAAGGAGCAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:5912050..5912120- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:36102912..36102982+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:21847504..21847574+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:30516966..30517036+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:6896986..6897056- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:42853782..42853852- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:7695891..7695891. Fragaria vesca Whole Genome v1.1 Assembly & Annotation