AX-89837440, AX-89837440 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89837440
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88878984
TypeSNP
SNP AllelesA/C
Probe 1AX-89837440.AX-89837440: TAAAGGTAACTGTTTCGATCTACTTCTTCC
5' Flanking SequenceGCCACATTTCCATTGACAAAGCTAGATGAAGAAGG
3' Flanking SequenceACTCCATGCACCTTGACTTTTCGGCCCGCTTTTGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A32.98AX-89837440View
Sequence
>AX-89837440 ID=AX-89837440; Name=AX-89837440; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCCACATTTCCATTGACAAAGCTAGATGAAGAAGGMACTCCATGCACCTT
GACTTTTCGGCCCGCTTTTGC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:10140802..10140872+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:12771846..12772051+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:28201439..28201509- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:27355193..27355263- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:23919456..23919526- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:12606816..12606816. Fragaria vesca Whole Genome v1.1 Assembly & Annotation