AX-89838372, AX-89838372 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89838372
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88881228
TypeSNP
SNP AllelesT/C
Probe 1AX-89838372.AX-89838372: TCGACTAAGTAGAGATAAAGGAAAGAACAT
5' Flanking SequenceCTATCAGCTGATTCATCTCTATTTCCTTTCTTGTA
3' Flanking SequenceCTGCCATGTAAAATTTGAAATCACCATCCACATGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A39.87AX-89838372View
Sequence
>AX-89838372 ID=AX-89838372; Name=AX-89838372; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTATCAGCTGATTCATCTCTATTTCCTTTCTTGTAYCTGCCATGTAAAAT
TTGAAATCACCATCCACATGT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:17359937..17360007+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:14966401..14966471+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:25148561..25148631+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:23200636..23200706+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:13755817..13755887+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:22108858..22108928+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:18129462..18129462. Fragaria vesca Whole Genome v1.1 Assembly & Annotation