AX-89896366, AX-89896366 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89896366
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88883211
TypeSNP
SNP AllelesT/G
Probe 1AX-89896366.AX-89896366: ACGTGTGACATTTGGATCAAACCGTTTGAA
5' Flanking SequenceCCTGCTGTTCCTGACTGGCCTGTTGAAGAAGCCTT
3' Flanking SequenceAAGTTTGCCAAACTAGGTTTACAGTGTGCAGAAAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A50.03AX-89896366View
Sequence
>AX-89896366 ID=AX-89896366; Name=AX-89896366; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCTGCTGTTCCTGACTGGCCTGTTGAAGAAGCCTTKAAGTTTGCCAAACT
AGGTTTACAGTGTGCAGAAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:22627663..22627733+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:22257616..22257686- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:15214930..15215000- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:15221033..15221097- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:6161686..6161756- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:980420..980458- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:23166451..23166451. Fragaria vesca Whole Genome v1.1 Assembly & Annotation