AX-89797102, AX-89797102 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89797102
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884717
TypeSNP
SNP AllelesT/C
Probe 1AX-89797102.AX-89797102: TCTTTCTCGTCGTTTCCGAATACTAAATCG
5' Flanking SequenceAAGGAAGAAAGAGCAGCAAAGGCTTATGATTTAGC
3' Flanking SequenceGCTCTCAAGTATTGGGGTCCAACTACTCATATTAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.01AX-89797102View
Sequence
>AX-89797102 ID=AX-89797102; Name=AX-89797102; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAGGAAGAAAGAGCAGCAAAGGCTTATGATTTAGCYGCTCTCAAGTATTG
GGGTCCAACTACTCATATTAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27072215..27072285+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:25936723..25936793+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:11388387..11388457- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:2370450..2370520- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11941863..11941933- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:26935915..26935915. Fragaria vesca Whole Genome v1.1 Assembly & Annotation