AX-89797114, AX-89797114 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89797114
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884767
TypeSNP
SNP AllelesT/C
Probe 1AX-89797114.AX-89797114: TTTACCCTGTTAGTTCGTGTTCCAATAGAA
5' Flanking SequenceACTATAAATGGGACAATCAAGCACAAGGTTATCTT
3' Flanking SequenceTCCAGCCTACCACACTTCTGGCAGGAGAGCCTACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.01AX-89797114View
Sequence
>AX-89797114 ID=AX-89797114; Name=AX-89797114; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACTATAAATGGGACAATCAAGCACAAGGTTATCTTYTCCAGCCTACCACA
CTTCTGGCAGGAGAGCCTACA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27216199..27216269+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26047780..26047850+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:11327618..11327688- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:2204522..2204592- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11864416..11864486- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27079899..27079899. Fragaria vesca Whole Genome v1.1 Assembly & Annotation