AX-89797129, AX-89797129 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89797129
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884833
TypeSNP
SNP AllelesA/G
Probe 1AX-89797129.AX-89797129: TGGACATAGGATTTGTCCACGAACGCTTTG
5' Flanking SequenceAACTGACCTGTATCCTAAACAGGTGCTTGCGAAAC
3' Flanking SequenceGCATATTGACATGCTTACAGCTCATGCATGGTTGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.69AX-89797129View
Sequence
>AX-89797129 ID=AX-89797129; Name=AX-89797129; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AACTGACCTGTATCCTAAACAGGTGCTTGCGAAACRGCATATTGACATGC
TTACAGCTCATGCATGGTTGT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27392915..27392985+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26169106..26169176+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:11048769..11048839- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:2016012..2016082- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11702940..11703010- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27256615..27256615. Fragaria vesca Whole Genome v1.1 Assembly & Annotation