AX-89897008, AX-89897008 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89897008
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884861
TypeSNP
SNP AllelesA/C
Probe 1AX-89897008.AX-89897008: CACTTACTTGTCAATGCTGTTTAATTACGA
5' Flanking SequenceAGCATATGATTCGATCTTAGCTTGTCTTCTCAGAG
3' Flanking SequenceAGCATTAATTTGTCGTAACTGTTCATTCACTCGTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A62.02AX-89897008View
Sequence
>AX-89897008 ID=AX-89897008; Name=AX-89897008; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCATATGATTCGATCTTAGCTTGTCTTCTCAGAGMAGCATTAATTTGTC
GTAACTGTTCATTCACTCGTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27470791..27470861+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26311961..26312031+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:9310512..9310582+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:10918688..10918758- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:1935264..1935334- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11622359..11622429- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27334491..27334491. Fragaria vesca Whole Genome v1.1 Assembly & Annotation