AX-89839821, AX-89839821 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89839821
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884892
TypeSNP
SNP AllelesT/G
Probe 1AX-89839821.AX-89839821: TTCTGACTCAGTGCCCTGCTCTTCTTTCCT
5' Flanking SequenceGCGAAAAGACTGAGTCACGGGACGAGAAGAAAGGA
3' Flanking SequenceCTCATGTCAAAAAGCAGATATGGCGGCAGCGTTGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.69AX-89839821View
Sequence
>AX-89839821 ID=AX-89839821; Name=AX-89839821; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCGAAAAGACTGAGTCACGGGACGAGAAGAAAGGAKCTCATGTCAAAAAG
CAGATATGGCGGCAGCGTTGA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27518684..27518754+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:1898406..1898476- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11573635..11573705- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27382384..27382384. Fragaria vesca Whole Genome v1.1 Assembly & Annotation