AX-89897037, AX-89897037 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89897037
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884918
TypeSNP
SNP AllelesA/G
Probe 1AX-89897037.AX-89897037: AAAAACTGTTTAAAGGTCTTTGACACCTCA
5' Flanking SequenceTACCTATCCCATTACCCTTCCTAAGAAAGGATTTT
3' Flanking SequenceACTCCACAGTTTCTGGAAATTTGTCAAAAAGGCCT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.69AX-89897037View
Sequence
>AX-89897037 ID=AX-89897037; Name=AX-89897037; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TACCTATCCCATTACCCTTCCTAAGAAAGGATTTTRACTCCACAGTTTCT
GGAAATTTGTCAAAAAGGCCT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27546976..27547046+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26377210..26377280+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:10802614..10802683- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:1870097..1870167- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11545385..11545455- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27410676..27410676. Fragaria vesca Whole Genome v1.1 Assembly & Annotation