AX-89897117, AX-89897117 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89897117
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88885100
TypeSNP
SNP AllelesT/C
Probe 1AX-89897117.AX-89897117: GACATGTCGCTCGATACGCGAGATTTTCAC
5' Flanking SequenceCAAAAGACATATCACTTGTTCTTAATATCAAGAGG
3' Flanking SequenceCACTTTTAGAGCGCATAGCTCGCTGTACAGGTGCT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A63.73AX-89897117View
Sequence
>AX-89897117 ID=AX-89897117; Name=AX-89897117; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAAAAGACATATCACTTGTTCTTAATATCAAGAGGYCACTTTTAGAGCGC
ATAGCTCGCTGTACAGGTGCT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27892197..27892267+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26722001..26722071+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:10497782..10497851- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:1559703..1559773- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11233654..11233724- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27755897..27755897. Fragaria vesca Whole Genome v1.1 Assembly & Annotation