AX-89797881, AX-89797881 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89797881
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88887481
TypeSNP
SNP AllelesA/G
Probe 1AX-89797881.AX-89797881: GTAATACAATGGACTTAAGACCCTACTTCG
5' Flanking SequenceATGATCATTATGTTACCTGAATTCTGGGATGAAGC
3' Flanking SequenceAAGGGAGAAGGCATGGTGTAAAGAGTCGATCCACT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A77.9AX-89797881View
Sequence
>AX-89797881 ID=AX-89797881; Name=AX-89797881; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGATCATTATGTTACCTGAATTCTGGGATGAAGCRAAGGGAGAAGGCAT
GGTGTAAAGAGTCGATCCACT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:33965334..33965404+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:32624645..32624715+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:4480073..4480143- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:31885858..31885928- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:5022510..5022580- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:32237949..32237949. Fragaria vesca Whole Genome v1.1 Assembly & Annotation