AX-89798107, AX-89798107 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89798107
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888206
TypeSNP
SNP AllelesA/G
Probe 1AX-89798107.AX-89798107: TTACATTCTATCTCCAAGTTGGAAAAACTG
5' Flanking SequenceATTCAAATGTAAGATAGAGGTTCAACCTTTTTGAC
3' Flanking SequenceGTTCATCTTGTTGTCTATGACTGGTTCATCTGATA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A85.74AX-89798107View
Sequence
>AX-89798107 ID=AX-89798107; Name=AX-89798107; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTCAAATGTAAGATAGAGGTTCAACCTTTTTGACRGTTCATCTTGTTGT
CTATGACTGGTTCATCTGATA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:34989977..34990047+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:33427784..33427854+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:3496667..3496737- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:30884789..30884859- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:4081743..4081813- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:33262592..33262592. Fragaria vesca Whole Genome v1.1 Assembly & Annotation