AX-89798167, AX-89798167 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89798167
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888398
TypeSNP
SNP AllelesA/G
Probe 1AX-89798167.AX-89798167: CCATTACTTTTACTACACCTTCCTCATATA
5' Flanking SequenceGGTATGGTAATGAAAATGATGTGGAAGGAGTATAT
3' Flanking SequenceTGAAAGATAGTGGCTTAAAGGGGACTACCAATGGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A89.26AX-89798167View
Sequence
>AX-89798167 ID=AX-89798167; Name=AX-89798167; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGTATGGTAATGAAAATGATGTGGAAGGAGTATATRTGAAAGATAGTGGC
TTAAAGGGGACTACCAATGGT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:35391196..35391266+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:8732577..8732647- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:3150258..3150328+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:30524388..30524458+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:9330759..9330828+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:33937233..33937302- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:11373..11443- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3713615..3713685- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:21120240..21120310- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:33663811..33663811. Fragaria vesca Whole Genome v1.1 Assembly & Annotation