AX-89898317, AX-89898317 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89898317
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888470
TypeSNP
SNP AllelesT/C
Probe 1AX-89898317.AX-89898317: ATGGGACGTTTTTAACTACAATACGTATGA
5' Flanking SequenceGATTGGGGAGCTAGCAGGTATAGCAGTTGGCTCTG
3' Flanking SequenceAGTATGCATAACATCAATTTTTGCAGGGTAAGCAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb6chromosomeFvb6:35546627..35546697 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6chromosomeFvb6:35500422..35500492 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6chromosomeFvb6:35557595..35557665 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6chromosomeFvb6:35552484..35552546 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6chromosomeFvb6:35495088..35495150 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6-2chromosomeFvb6-2:30503417..30503487 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:3639406..3639476 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:372441..372511 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:3619599..3619661 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-4chromosomeFvb6-4:33809319..33809389 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-3chromosomeFvb6-3:3014936..3015006 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-2chromosomeFvb6-2:29602148..29602218 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:3563880..3563950 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:3573096..3573166 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:360230..360300 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:348480..348554 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:3590734..3590796 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG6chromosomeLG6:33773037..33773037 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89898317 ID=AX-89898317; Name=AX-89898317; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GATTGGGGAGCTAGCAGGTATAGCAGTTGGCTCTGYAGTATGCATAACAT
CAATTTTTGCAGGGTAAGCAG