AX-89798204, AX-89798204 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89798204
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888540
TypeSNP
SNP AllelesA/G
Probe 1AX-89798204.AX-89798204: CAGCCATTCCCTTCGTTGTCATTGACTTCT
5' Flanking SequenceTCGAGGTCGGTAAGGGAAGCAACAGTAACTGAAGA
3' Flanking SequenceTGATCATGATTATCGAAGGTGTAACGATGGACTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A89.26AX-89798204View
Sequence
>AX-89798204 ID=AX-89798204; Name=AX-89798204; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCGAGGTCGGTAAGGGAAGCAACAGTAACTGAAGARTGATCATGATTATC
GAAGGTGTAACGATGGACTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:35648347..35648417+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:33970874..33970944+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3459793..3459861+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:2936833..2936903- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:30394891..30394961- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3480305..3480362- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:33920962..33920962. Fragaria vesca Whole Genome v1.1 Assembly & Annotation