AX-89841768, AX-89841768 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89841768
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88890301
TypeSNP
SNP AllelesA/G
Probe 1AX-89841768.AX-89841768: TAACACGAACACATGATCTTGAGTACCATT
5' Flanking SequenceACTTGATTGTGCTTGTGTACTAGAACTCATGGTAA
3' Flanking SequenceGAGGAAGGATCTTGATCGTCCAGTGAGCCTACAAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A95.59AX-89841768View
Sequence
>AX-89841768 ID=AX-89841768; Name=AX-89841768; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACTTGATTGTGCTTGTGTACTAGAACTCATGGTAARGAGGAAGGATCTTG
ATCGTCCAGTGAGCCTACAAC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:37036800..37036870+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:29429954..29430024+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:1833522..1833592- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:2172953..2173023- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:36885425..36885425. Fragaria vesca Whole Genome v1.1 Assembly & Annotation