AX-89799080, AX-89799080 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89799080
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88891046
TypeSNP
SNP AllelesT/C
Probe 1AX-89799080.AX-89799080: CTTTTTCGATTGAAGTCCTCAAATAAGTTC
5' Flanking SequenceATACAGAAAAAGCTAACTTCAGGAGTTTATTCAAG
3' Flanking SequenceCCATTGGAGTTTGCTGCTGACGTCAGGCTTACTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A95.59AX-89799080View
Sequence
>AX-89799080 ID=AX-89799080; Name=AX-89799080; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATACAGAAAAAGCTAACTTCAGGAGTTTATTCAAGYCCATTGGAGTTTGC
TGCTGACGTCAGGCTTACTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:37964584..37964654- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:1216846..1216916+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:28187463..28187533+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:1409970..1410040+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:1379389..1379459- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:38592607..38592607. Fragaria vesca Whole Genome v1.1 Assembly & Annotation