AX-89850369, AX-89850369 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850369
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88877758
TypeSNP
SNP AllelesC/G
Probe 1AX-89850369.AX-89850369_probe1: TCCTAAGGGTCAATACCACTTAGATTACGC
Probe 2AX-89850369.AX-89912997_probe2: TCCTAAGGGTCAATACCACTTAGATTACGG
5' Flanking SequenceGTAGTAAGGATTCCCAGTTATGGTGAATCTAATGC
3' Flanking SequenceTCCTCTCTTTTGGCATGGAATCCTGCATGCAAGTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A32.84AX-89850369View
Sequence
>AX-89850369 ID=AX-89850369; Name=AX-89850369; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTAGTAAGGATTCCCAGTTATGGTGAATCTAATGCSTCCTCTCTTTTGGC
ATGGAATCCTGCATGCAAGTA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:12002282..12002352+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:11927574..11927644+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:24026737..24026807+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:31041173..31041243- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:30104430..30104500- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:16646944..16647014- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:9631554..9631554. Fragaria vesca Whole Genome v1.1 Assembly & Annotation