AX-89906007, AX-89906007 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906007
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88879867
TypeSNP
SNP AllelesA/G
Probe 1AX-89906007.AX-89906007: ACATTAAAACAATAAGAAGGTTGAAAAACT
5' Flanking SequenceATAAATATGTTAAACAGAAAAGAAAGGCGATAAAC
3' Flanking SequenceTCAAAAAGTTGGAAGAATAACAAAATTACAGCGTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A34.38AX-89906007View
Sequence
>AX-89906007 ID=AX-89906007; Name=AX-89906007; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATAAATATGTTAAACAGAAAAGAAAGGCGATAAACRTCAAAAAGTTGGAA
GAATAACAAAATTACAGCGTA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:14395102..14395172+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:14717750..14717822+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:23112404..23112474+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:13715005..13715076- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:25979500..25979571- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:24006552..24006623- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:14636102..14636102. Fragaria vesca Whole Genome v1.1 Assembly & Annotation