AX-89850037, AX-89850037 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850037
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88886484
TypeSNP
SNP AllelesT/C
Probe 1AX-89850037.AX-89850037: GGTCAACTACTCCAACCATGGTCTCCCTTT
5' Flanking SequenceATGTCCCAGTTGATGAGGTTGGTACCAGAGGGAAA
3' Flanking SequenceATCGATTATTTAATTCATTCTTTTTGGGATCCACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A72.53AX-89850037View
Sequence
>AX-89850037 ID=AX-89850037; Name=AX-89850037; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGTCCCAGTTGATGAGGTTGGTACCAGAGGGAAAYATCGATTATTTAAT
TCATTCTTTTTGGGATCCACC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:31154505..31154575+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:7318389..7318458+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:34972930..34973000+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:7666937..7667007+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:29661076..29661146- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:30435966..30435966. Fragaria vesca Whole Genome v1.1 Assembly & Annotation