AX-89906315, AX-89906315 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906315
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88886714
TypeSNP
SNP AllelesA/T
Probe 1AX-89906315.AX-89906315_probe1: GCACTCGTTATCCAGAATGTACATTTTCTA
Probe 2AX-89906315.AX-89861831_probe2: GCACTCGTTATCCAGAATGTACATTTTCTT
5' Flanking SequenceAGCTTGGCAAGGAAATTTTGAGGCATGGGTACAAA
3' Flanking SequenceTCTTTTACATGTAAGACCTATTGCTCACGCAATTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906315 ID=AX-89906315; Name=AX-89906315; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCTTGGCAAGGAAATTTTGAGGCATGGGTACAAAWTCTTTTACATGTAA
GACCTATTGCTCACGCAATTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:31582402..31582472+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:11687114..11687143- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:19311532..19311602+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:19276731..19276801+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:2825909..2825979+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:21312962..21313032- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:8086311..8086381- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:14040876..14040946- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:30863863..30863863. Fragaria vesca Whole Genome v1.1 Assembly & Annotation