AX-89850048, AX-89850048 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850048
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88886745
TypeSNP
SNP AllelesA/C
Probe 1AX-89850048.AX-89850048: CATTAGTGTAACCAAGAACATAACGGTATA
5' Flanking SequenceTTCAAGTAATCACATTGGTTCTTGTATTGCCATAT
3' Flanking SequenceTGTCGGAAAGACTGTATATAAACCTCACCGATTTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850048 ID=AX-89850048; Name=AX-89850048; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTCAAGTAATCACATTGGTTCTTGTATTGCCATATMTGTCGGAAAGACTG
TATATAAACCTCACCGATTTA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:31623125..31623195+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:7545876..7545931+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:35238416..35238485+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:10614896..10614966+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:30904586..30904586. Fragaria vesca Whole Genome v1.1 Assembly & Annotation