AX-89850078, AX-89850078 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850078
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88887482
TypeSNP
SNP AllelesA/T
Probe 1AX-89850078.AX-89850078_probe1: GAAGCAGAGCCCTACAACAATATGGTCGAA
Probe 2AX-89850078.AX-89912933_probe2: GAAGCAGAGCCCTACAACAATATGGTCGAT
5' Flanking SequenceTAACGCCTTCGTCTCGGGATGTTGTTATACCAGCT
3' Flanking SequenceGCTGTTTCTCTTCTGTTTGTTTTTTTTTTTCTTAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850078 ID=AX-89850078; Name=AX-89850078; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TAACGCCTTCGTCTCGGGATGTTGTTATACCAGCTWGCTGTTTCTCTTCT
GTTTGTTTTTTTTTTTCTTAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:33966977..33967047+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:4478407..4478485- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:31884142..31884218- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:5020785..5020853- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:32239592..32239592. Fragaria vesca Whole Genome v1.1 Assembly & Annotation