AX-89850081, AX-89850081 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850081
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88887540
TypeSNP
SNP AllelesT/C
Probe 1AX-89850081.AX-89850081: AATCGTCTACTTCACGAAAGTTGGTCACTT
5' Flanking SequenceCAGAGTTAGCAGATGAAGTGCTTTCAACCAGTGAA
3' Flanking SequenceAGACGATGTGAACTTACGAATTGAAAACAGTCAAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850081 ID=AX-89850081; Name=AX-89850081; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAGAGTTAGCAGATGAAGTGCTTTCAACCAGTGAAYAGACGATGTGAACT
TACGAATTGAAAACAGTCAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:34046276..34046346+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:21007956..21008025+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-2 chromosome Fvb5-2:20030712..20030781+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:23422896..23422965+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:6167936..6168005+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:7568964..7569032+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:4425338..4425406- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:31818490..31818844- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:4940725..4940795- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:32318891..32318891. Fragaria vesca Whole Genome v1.1 Assembly & Annotation