AX-89850100, AX-89850100 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850100
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888010
TypeSNP
SNP AllelesT/C
Probe 1AX-89850100.AX-89850100: TCGGACGAGGGTACAAGCTGTTCATTATCT
5' Flanking SequenceGACGTAGCCTGCTCCCATGTTCGACAAGTAATAGA
3' Flanking SequenceCTCAGTCGACACCAGCTTTTCACTTGACTCCTTTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850100 ID=AX-89850100; Name=AX-89850100; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GACGTAGCCTGCTCCCATGTTCGACAAGTAATAGAYCTCAGTCGACACCA
GCTTTTCACTTGACTCCTTTC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:34704884..34704954+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:33241988..33242059+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:166544..166614+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:31161932..31162000- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:32977499..32977499. Fragaria vesca Whole Genome v1.1 Assembly & Annotation