AX-89850112, AX-89850112 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850112
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888541
TypeSNP
SNP AllelesC/G
Probe 1AX-89850112.AX-89850112_probe1: CACCCCCCTGTTTTCATAAAGATTCATCCC
Probe 2AX-89850112.AX-89856467_probe2: CACCCCCCTGTTTTCATAAAGATTCATCCG
5' Flanking SequenceCTAATCGTGGGGGGACAAAAGTATTTCTAAGTAGG
3' Flanking SequenceGAACGGGTTGCAGATCGAAATCGAAAAAGTTTCTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850112 ID=AX-89850112; Name=AX-89850112; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTAATCGTGGGGGGACAAAAGTATTTCTAAGTAGGSGAACGGGTTGCAGA
TCGAAATCGAAAAAGTTTCTC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:35648462..35648532+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:33970989..33971059+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3461560..3461630+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:2936718..2936788- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:3478502..3478571- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:33921077..33921077. Fragaria vesca Whole Genome v1.1 Assembly & Annotation