AX-89850128, AX-89850128 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850128
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88888998
TypeSNP
SNP AllelesA/G
Probe 1AX-89850128.AX-89850128: CAAGAAAACTGTGTAGAGTACCTCGACTCA
5' Flanking SequenceCGATTGTTCTTTTGACACATCTCATGGAGCTGAGT
3' Flanking SequenceTTAAAATGTATCTGTATAGTCTCCGGAGTTATTAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A73.21AX-89850128View
Sequence
>AX-89850128 ID=AX-89850128; Name=AX-89850128; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CGATTGTTCTTTTGACACATCTCATGGAGCTGAGTRTTAAAATGTATCTG
TATAGTCTCCGGAGTTATTAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:32298310..32298380- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-1 chromosome Fvb6-1:6509363..6509433+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:30867002..30867072- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:33659251..33659321- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:34684035..34684035. Fragaria vesca Whole Genome v1.1 Assembly & Annotation