AX-89850575, AX-89850575 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850575
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88891952
TypeSNP
SNP AllelesA/T
Probe 1AX-89850575.AX-89850575_probe1: CCGTACTCCTATTATAATTCAAAGATGTCA
Probe 2AX-89850575.AX-89862126_probe2: CCGTACTCCTATTATAATTCAAAGATGTCT
5' Flanking SequenceTCAAGCGGCATGAGGATAATATTAAGTTTCTACAG
3' Flanking SequenceCTGAGATAAAACGTTTAAGTCAGTCAATCCTTAAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850575 ID=AX-89850575; Name=AX-89850575; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCAAGCGGCATGAGGATAATATTAAGTTTCTACAGWCTGAGATAAAACGT
TTAAGTCAGTCAATCCTTAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:13880164..13880234- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:9768984..9769054+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:10223159..10223228+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:19647857..19647927- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:13065426..13065496- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:22005249..22005319- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:20239310..20239380- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:1613491..1613491. Fragaria vesca Whole Genome v1.1 Assembly & Annotation