AX-89906596, AX-89906596 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906596
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896112
TypeSNP
SNP AllelesT/C
Probe 1AX-89906596.AX-89906596: CATTGTTGCGGTTAAAACTATTCATAACTG
5' Flanking SequenceTGAAACCACAGGGAACCTGAATATATGAAACTTAA
3' Flanking SequenceGTCAATACTTATCAAAATTGGCGTTGTTACTTCAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:9799776..9799846 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb6chromosomeFvb6:15336509..15336579 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:28396625..28396696 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:9616672..9616740 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:14073478..14073548 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb2chromosomeFvb2:23131881..23131951 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-2chromosomeFvb7-2:14903012..14903044 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:14785484..14785516 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:8561104..8561136 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-4chromosomeFvb5-4:21473501..21473571 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-1chromosomeFvb4-1:16640185..16640256 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-3chromosomeFvb4-3:3960322..3960393 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-4chromosomeFvb1-4:9911937..9912007 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG7chromosomeLG7:11218571..11218571 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89906596 ID=AX-89906596; Name=AX-89906596; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGAAACCACAGGGAACCTGAATATATGAAACTTAAYGTCAATACTTATCA
AAATTGGCGTTGTTACTTCAA