AX-89906597, AX-89906597 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906597
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88896159
TypeSNP
SNP AllelesT/C
Probe 1AX-89906597.AX-89906597: TAATGTACTCATTAAATCTTGGTACATCTT
5' Flanking SequenceCGATGAAGATAGTGAAAATTTTGTATCGCATAGGT
3' Flanking SequenceTTCTACATGGTTCTAAATTACTCATGTAATTCCAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:9919776..9919846 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb5chromosomeFvb5:29034473..29034536 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:3071743..3071812 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:26793554..26793624 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:2165180..2165377 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:25407321..25407387 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:10252262..10252332 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:8508374..8508438 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:98361..98422 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:6702033..6702093 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:5364686..5364756 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:10769801..10769871 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:29166094..29166164 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb2chromosomeFvb2:2779996..2780066 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:19404485..19404550 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4-2chromosomeFvb4-2:14133390..14133460 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb2-1chromosomeFvb2-1:6173179..6173240 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG7chromosomeLG7:11338571..11338571 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89906597 ID=AX-89906597; Name=AX-89906597; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CGATGAAGATAGTGAAAATTTTGTATCGCATAGGTYTTCTACATGGTTCT
AAATTACTCATGTAATTCCAT