AX-89850673, AX-89850673 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850673
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88900169
TypeSNP
SNP AllelesT/G
Probe 1AX-89850673.AX-89850673: ATGACCTAACTCATTTCCAATACCTAAACA
5' Flanking SequenceAGGGTTACTGGATTGAGTAAAGGTTATGGATTTGT
3' Flanking SequenceAAGTATGCTGATGTTCAGATGGCTAATAATGCTAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850673 ID=AX-89850673; Name=AX-89850673; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGGGTTACTGGATTGAGTAAAGGTTATGGATTTGTKAAGTATGCTGATGT
TCAGATGGCTAATAATGCTAT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:19918788..19918858+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:23199789..23199853- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-3 chromosome Fvb7-3:4504112..4504182+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:26215397..26215467+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:25858223..25858293+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:27388403..27388473+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:23540114..23540159+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:3407893..3407963- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:4386421..4386491- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:13823787..13823928- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:14466980..14467044- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:18852652..18852652. Fragaria vesca Whole Genome v1.1 Assembly & Annotation