AX-89850701, AX-89850701 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850701
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88901161
TypeSNP
SNP AllelesC/G
Probe 1AX-89850701.AX-89850701_probe1: AAACGTGAGAGTTCCCACCTACTTTCAAAC
Probe 2AX-89850701.AX-89864357_probe2: AAACGTGAGAGTTCCCACCTACTTTCAAAG
5' Flanking SequenceATCAAATTTGCACTCTCAAGGGTGGATGAAAGTTT
3' Flanking SequenceGTTTTTAGATATGAATCGGTATCCCGAGTGCAAAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850701 ID=AX-89850701; Name=AX-89850701; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATCAAATTTGCACTCTCAAGGGTGGATGAAAGTTTSGTTTTTAGATATGA
ATCGGTATCCCGAGTGCAAAT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:22502731..22502801- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:22470893..22470956- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:1074786..1074862+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:1024086..1024162+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:2128977..2129053+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28760167..28760237- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28743690..28743760- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28736674..28736744- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28706062..28706138- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:31292858..31292934- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:31268225..31268301- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29720161..29720237- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29749479..29749548- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:20410850..20410850. Fragaria vesca Whole Genome v1.1 Assembly & Annotation