NZscSI, NZscSI (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	NZscSI
Genbank ID	N/A
Type	SCAR
Species	Malus x domestica
Primer 1	NZscSI.F: GTTCACGGTTTGTGGCCTTC
Primer 2	NZscSI.R1: GACCTCAACCAATTCAGTC
Primer 3	NZscSI.R2: GACCTCAACCAATTCAGT
Publication	[view all]
Contact	S. Gardiner

Contact

Name

Details

S. Gardiner

First name:	Sue
Last name:	Gardiner
Institution:	HortResearch, New Zealand
Address:	HortResearch Palmerston North Tennent Drive Private Bag 11 030 Palmerston North, New Zealand
Email:	sgardiner@hortresearch.co.nz
Phone:	64-6-356 8080

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr17A	chromosome	chr17A:30346708..30347457 .	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2009	Celton J-M, Tustin DS, Chagne D, Gardiner SE. Construction of a dense genetic linkage map for apple rootstocks using SSRs developed from Malus ESTs and Pyrus genomic sequences. Tree Genetics and Genomes. 2009; 5(1):93-107.