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Marker Overview
Name | JPsnpHou00618 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | C/G |
5' Flanking Sequence | CTGGGTTTTGCTGTACACTGCATCCTCTGAGCTGTTGCCACTACTCGCAGCAGGTGGCAC
ACCATTGTTGAAGGTAAATAAAATAACCCAAGCAATCAACAGTAGCAGCCTGACCATTTT
GAACTCCACCACGCTGTCCGGCCCTTTTGCTAGCTTCTCGTTCAGTGCATCTGCTAGCTT
TGAAGTTAGGAGTCCGTCAAGAATCCAGGTGGAATTCAAGGAAGGCAGCTTTCAGCCTCC
GGAGATTAAGTCAAGCGTTGATCTCCCTCAAGAAGTGGAAGTCTTTGGGCAGAAAATCAA
TTTATCGCCCGTCCAGCAAACTCTCAATCCTTTGCAGGATGCTGTTGCAGGTATCTCTAG
GACCATTTCTGGTCAGCCACCGCTTAAGGTTCCCGTTCCAGGTGAACGGACCAAGTCTTG
GCTTCTTATTACATACCTTGATGAGGATCTTCGGATCTCAAGGGGGGATGGTGGTCTTTT
TGTGCTTGCTAGAGAAGGGAGCCCGCTTTTATATCAGTAACGCGGTACGTTCAGTTCGGT
TGTGTCATGGATACGAGGTCATATACATATAGTCAAACTCGTAnAAGGAAAATGATGGTA
TATTTATATTGTGTACTTGAGTATTTTTCAGATATGAAAATGTATCCCTATTTTGCAGCT
TCCGCTTCCAGTCTGCATTGCTGAGA |
3' Flanking Sequence | GCCAATGATTAAAATGCAGATTAAGGAATAGGGTTGGTTGAATTGTTATGCATCAGTTAG
ATACATTTCGTCAACATTGTTGTCATTTTTTTTTT |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 687 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00618 ID=JPsnpHou00618; Name=JPsnpHou00618; organism=Pyrus pyrifolia; type=genetic_marker; length=782bp CTGGGTTTTGCTGTACACTGCATCCTCTGAGCTGTTGCCACTACTCGCAG CAGGTGGCACACCATTGTTGAAGGTAAATAAAATAACCCAAGCAATCAAC AGTAGCAGCCTGACCATTTTGAACTCCACCACGCTGTCCGGCCCTTTTGC TAGCTTCTCGTTCAGTGCATCTGCTAGCTTTGAAGTTAGGAGTCCGTCAA GAATCCAGGTGGAATTCAAGGAAGGCAGCTTTCAGCCTCCGGAGATTAAG TCAAGCGTTGATCTCCCTCAAGAAGTGGAAGTCTTTGGGCAGAAAATCAA TTTATCGCCCGTCCAGCAAACTCTCAATCCTTTGCAGGATGCTGTTGCAG GTATCTCTAGGACCATTTCTGGTCAGCCACCGCTTAAGGTTCCCGTTCCA GGTGAACGGACCAAGTCTTGGCTTCTTATTACATACCTTGATGAGGATCT TCGGATCTCAAGGGGGGATGGTGGTCTTTTTGTGCTTGCTAGAGAAGGGA GCCCGCTTTTATATCAGTAACGCGGTACGTTCAGTTCGGTTGTGTCATGG ATACGAGGTCATATACATATAGTCAAACTCGTAnAAGGAAAATGATGGTA TATTTATATTGTGTACTTGAGTATTTTTCAGATATGAAAATGTATCCCTA TTTTGCAGCTTCCGCTTCCAGTCTGCATTGCTGAGAsGCCAATGATTAAA ATGCAGATTAAGGAATAGGGTTGGTTGAATTGTTATGCATCAGTTAGATA CATTTCGTCAACATTGTTGTCATTTTTTTTTT
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