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Marker Overview
Name | JPsnpHou00588 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | TAACCTTCAGATGTTTGGGCTTCCTAGTCAAGGAGTTCCAGTGCCGATGCAACGTGCTCC
CTTAGCTCCCTCATCGGCAGGTCCCTTTGTGAAGTCATCTGGAGGACTAAATGCAAGCAG
TTCAGGAGGACCTGTGGAAAATGTGGAATCAGCTCCAGTTTCTGGTTCAAAGGATTCAGT
TCAGAACATGAACTCACAAGCGATGCAAAACAGCAATGCCAATAGCTCTATGAATCAAAC
ATCTAGTCAGGGCCAAGCAACTAATGAGGGATTTGCACAGTCTGCATTGGTGCGAAATAA
TGTTCAAGCGACTGATGTTAACAACAACAGAGCTGACGGATAGCAGAAACGACGTTGTGT
TTAGCCGAGCAGCTAGTTTCGGTTAACAAGCAGTTCTATCCGTCGTTGGAGGAGAGAAAT
CCATGTTGCAGCATCCTGAGATTGGACCTTTTTTGCTTGCTTCTGATCTGGGTAGATGCA
TTTTACAAGTACACAAAAAAGTATGACCGAGTCGAAGAGTTTGATTGAACCATGGTAATA
ACCATCTGAATTCTAATTTCAGGAGAGTGCAATTACATGTTGCACAGAATTAGGTACCTT
GAGAAGACTTTGAAGTCCCTTCTAGCATTTGTACATTCACTTTGTAG |
3' Flanking Sequence | CGGTGAGGTAGCGCGATGCAAACGAGTTGAGAATATACCGGGCTATGTATTAAATGTGTG
TTTTGGACATATTATAACAATTCTTTGAATTAATGAAATGATAGTAATGTCTGAATACAT
CTGTTGTACTCTACC |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 648 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00588 ID=JPsnpHou00588; Name=JPsnpHou00588; organism=Pyrus pyrifolia; type=genetic_marker; length=783bp TAACCTTCAGATGTTTGGGCTTCCTAGTCAAGGAGTTCCAGTGCCGATGC AACGTGCTCCCTTAGCTCCCTCATCGGCAGGTCCCTTTGTGAAGTCATCT GGAGGACTAAATGCAAGCAGTTCAGGAGGACCTGTGGAAAATGTGGAATC AGCTCCAGTTTCTGGTTCAAAGGATTCAGTTCAGAACATGAACTCACAAG CGATGCAAAACAGCAATGCCAATAGCTCTATGAATCAAACATCTAGTCAG GGCCAAGCAACTAATGAGGGATTTGCACAGTCTGCATTGGTGCGAAATAA TGTTCAAGCGACTGATGTTAACAACAACAGAGCTGACGGATAGCAGAAAC GACGTTGTGTTTAGCCGAGCAGCTAGTTTCGGTTAACAAGCAGTTCTATC CGTCGTTGGAGGAGAGAAATCCATGTTGCAGCATCCTGAGATTGGACCTT TTTTGCTTGCTTCTGATCTGGGTAGATGCATTTTACAAGTACACAAAAAA GTATGACCGAGTCGAAGAGTTTGATTGAACCATGGTAATAACCATCTGAA TTCTAATTTCAGGAGAGTGCAATTACATGTTGCACAGAATTAGGTACCTT GAGAAGACTTTGAAGTCCCTTCTAGCATTTGTACATTCACTTTGTAGyCG GTGAGGTAGCGCGATGCAAACGAGTTGAGAATATACCGGGCTATGTATTA AATGTGTGTTTTGGACATATTATAACAATTCTTTGAATTAATGAAATGAT AGTAATGTCTGAATACATCTGTTGTACTCTACC
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