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Marker Overview
Name | JPsnpHou00482 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | A/C |
5' Flanking Sequence | TCAATTATTACCACTCCTAATACAGAGGCTGTTGCAATCTTGAACAATTTATGCAATGAT
CCCAAGAATGTTGTCTTTCTTGTTAGTGGGAAAGACAGAAAGACTTTAACCAAGTGGTTT
TCTTCTTGTGAAAAGCTTGGGATTGCAGCAGAGCATGGCTATTATGTGAGGTCAAATCAT
AATGCCGACTGGGAAACTTGTATCTCTATTCCAGATTTTGGTTGGAAACAGATTGCTGAG
CCAGTAATGCAGTTATATACCGAAACAACCGATGGTTCTACCATAGAGACCAAAGAAAGT
GCTCTTGTTTGGAATTATCAATACGCAGATCCAGATTTTGGCTTTTGTCAGGCTAAGGAG
CTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGTCAG
CACATTGTAGAAGTTAAACCTCAGGGTGTCAACAAAGGCCTTGTAGCGGAACGTCTCCTC
GTAGCAATGAAACAGAAAGCAATGCTTCCAGATTTTGTTCTGTGTATTGGGGATGACAGA
TCCGACGAAGACATGTTTGAGGCGATA |
3' Flanking Sequence | TGAGTTCAAGGGACTCTCTCTCTCCGGTnGCTGAAGTGTTTGCTTGCACTGTCGGTCAGA
AGCCCAGCAAGGCCAAGTACTACCTGGAAGACACAACTGAGATTCTGAAAATGTTACAGG
GGCTGGCCAATGCTTCGGAGCAGGCGGCCAAAAGCGCTGCACCGCAACTTTCTCAGCGAG
TACTTACTTTAGAAAAGTAAATAGATTATTCATTGAAACCCCGTTCTGTTATTATGCAGT
GACTAGTGTGTGAGTGGCTAAATTGTAAAATCTGCTCATATCTTGATGTTGGCCTTCATT
ACTTTGTGTGTTTCTGAATCTTCCAACCGAGATGTTTTGGCGGGGCGCAGAGCTTACAGA
TTGTACTAGCTCATTTCCACATACCAAACGCAGCCTCAGGATGTATGAATCCAATATTAT
AAATCGTGTAACGATATTATCCAGTTTGTGAAGGAC |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 568 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00482 ID=JPsnpHou00482; Name=JPsnpHou00482; organism=Pyrus pyrifolia; type=genetic_marker; length=1024bp TCAATTATTACCACTCCTAATACAGAGGCTGTTGCAATCTTGAACAATTT ATGCAATGATCCCAAGAATGTTGTCTTTCTTGTTAGTGGGAAAGACAGAA AGACTTTAACCAAGTGGTTTTCTTCTTGTGAAAAGCTTGGGATTGCAGCA GAGCATGGCTATTATGTGAGGTCAAATCATAATGCCGACTGGGAAACTTG TATCTCTATTCCAGATTTTGGTTGGAAACAGATTGCTGAGCCAGTAATGC AGTTATATACCGAAACAACCGATGGTTCTACCATAGAGACCAAAGAAAGT GCTCTTGTTTGGAATTATCAATACGCAGATCCAGATTTTGGCTTTTGTCA GGCTAAGGAGCTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAG TTTCTGTCAAGAGTGGTCAGCACATTGTAGAAGTTAAACCTCAGGGTGTC AACAAAGGCCTTGTAGCGGAACGTCTCCTCGTAGCAATGAAACAGAAAGC AATGCTTCCAGATTTTGTTCTGTGTATTGGGGATGACAGATCCGACGAAG ACATGTTTGAGGCGATAmTGAGTTCAAGGGACTCTCTCTCTCCGGTnGCT GAAGTGTTTGCTTGCACTGTCGGTCAGAAGCCCAGCAAGGCCAAGTACTA CCTGGAAGACACAACTGAGATTCTGAAAATGTTACAGGGGCTGGCCAATG CTTCGGAGCAGGCGGCCAAAAGCGCTGCACCGCAACTTTCTCAGCGAGTA CTTACTTTAGAAAAGTAAATAGATTATTCATTGAAACCCCGTTCTGTTAT TATGCAGTGACTAGTGTGTGAGTGGCTAAATTGTAAAATCTGCTCATATC TTGATGTTGGCCTTCATTACTTTGTGTGTTTCTGAATCTTCCAACCGAGA TGTTTTGGCGGGGCGCAGAGCTTACAGATTGTACTAGCTCATTTCCACAT ACCAAACGCAGCCTCAGGATGTATGAATCCAATATTATAAATCGTGTAAC GATATTATCCAGTTTGTGAAGGAC
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