JPsnpHou00050, JPsnpHou00050 (genetic_marker) Pyrus pyrifolia

Marker Overview


Name	JPsnpHou00050
dbSNP ID	N/A
Type	SNP
SNP Alleles	A/G
5' Flanking Sequence	GCCATTTGCAGGAGGCATGGCGGTGTTCTGTTTTGAGGGGTTTGGAATGACATTAGCACT GGAAGGTTCTATGCGGGATAAAAGTACATTCCCAAGGTTGCTTGCTCAGGCTTTCACAGG GATAACCCTTGTCTATTGTTTATTCGGATTCGCCGGTTACATGGCTTATGGTGATCAAAC CCTCGAAATTGTCACTCTCAATCTCCCTCACAATTGGTCTGCCATGGTGGTTCAGATTGG TTTGTGCTTGGGGCTAATATTTACCTTCCCAATCATGCTACACCCGATAAACGAGATCAT AGAAGGAAAGTTAGTAAAAGGAAAATGGTTTCAGAACGCTCATGATGACAATGATGATTA TTCGATGACGCCGCCGCTAGGAAGGTTTGCAGTATACGTGAGTCGAGCAATAGTGGTGAT CGTATTGGCAGTCTTGGCCTCGTGCGTTCCAGGGTTTGCAGTATTTGCGTCGCTCGTGGG AAGTACCGTATGTGCACTGATCTCATTTGTTCTACCTGCTTCATTTCACTTAGCATTGTT GGGTTCTTCCCTAAAATTGTGGCAA
3' Flanking Sequence	GAACCTTGGATTGTTGCATATTATTCTGCGGAATGCTTTTTGCCGCATACGGCGTTTACA ATGCCGTAGTTGGCGTTTGAATCGCTTGTTGTAATTAGTAnTGTACAAGTAAGAGATATA TGAATACAAACTGTACAATGGGGAAGCAGAAGAACTGTAATCTGTATCTGGATTCCAATA TTCGATGTACCACCAGTGTATAAAATTCTTTCAGTCCAATGAATGCAGAAATCCGAAATC TGGACCAATAC
Species	Pyrus pyrifolia
Publication	[view all]
Contact	Toshiya Yamamoto
Comment	SNP position in sequence: 566

Contact

Name

Details

Toshiya Yamamoto

First name:	Toshiya
Last name:	Yamamoto
Institution:	National Institute of Fruit Tree Science, Graduate School of Life and Environmental Sciences, University of Tsukuba
Address:	National Institute of Fruit Tree Science, 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan
Country:	Japan
Email:	toshiya@affrc.go.jp
Last update:	Apr 2014

Publications


Year	Publication
2014	Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863.

Sequence

>JPsnpHou00050 ID=JPsnpHou00050; Name=JPsnpHou00050; organism=Pyrus pyrifolia; type=genetic_marker; length=817bp
GCCATTTGCAGGAGGCATGGCGGTGTTCTGTTTTGAGGGGTTTGGAATGA
CATTAGCACTGGAAGGTTCTATGCGGGATAAAAGTACATTCCCAAGGTTG
CTTGCTCAGGCTTTCACAGGGATAACCCTTGTCTATTGTTTATTCGGATT
CGCCGGTTACATGGCTTATGGTGATCAAACCCTCGAAATTGTCACTCTCA
ATCTCCCTCACAATTGGTCTGCCATGGTGGTTCAGATTGGTTTGTGCTTG
GGGCTAATATTTACCTTCCCAATCATGCTACACCCGATAAACGAGATCAT
AGAAGGAAAGTTAGTAAAAGGAAAATGGTTTCAGAACGCTCATGATGACA
ATGATGATTATTCGATGACGCCGCCGCTAGGAAGGTTTGCAGTATACGTG
AGTCGAGCAATAGTGGTGATCGTATTGGCAGTCTTGGCCTCGTGCGTTCC
AGGGTTTGCAGTATTTGCGTCGCTCGTGGGAAGTACCGTATGTGCACTGA
TCTCATTTGTTCTACCTGCTTCATTTCACTTAGCATTGTTGGGTTCTTCC
CTAAAATTGTGGCAArGAACCTTGGATTGTTGCATATTATTCTGCGGAAT
GCTTTTTGCCGCATACGGCGTTTACAATGCCGTAGTTGGCGTTTGAATCG
CTTGTTGTAATTAGTAnTGTACAAGTAAGAGATATATGAATACAAACTGT
ACAATGGGGAAGCAGAAGAACTGTAATCTGTATCTGGATTCCAATATTCG
ATGTACCACCAGTGTATAAAATTCTTTCAGTCCAATGAATGCAGAAATCC
GAAATCTGGACCAATAC