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Marker Overview
| Name | JPsnpHou00081 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | GATCGAAGCCTTCGAGTGACGCACAACCTGACTGTTTTTGGTGGCTGCGGCCTTGTGCTC
TCGGTCATCACTGGGCTATTTGGAATTAATGTTGATGGAATGCCGGGTGCAGATAACGCT
CCATATGCCTTTGGTGTATTTTCAGCCATTCTCATCTTTATAGGAACTGTACTGATTGCG
GTCGGGCTGCTCTACCTTGGGTTGAAAAACCGGTCACTGGAGAGCAAGTTGAAGTTAGAA
AGTTGGAGCTTCAAGAGTTGGTTAAGATGTTTCAGCACGAGGCAGAGAATCATGAAGTGG
TTCGTAAAAATGTGTCTCGCAACAGTCTACCGCCAACAGCCGGCGATGCTTTCCTACGTG
ATGCAGATTATGTCATGATTCAGTGAG |
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| 3' Flanking Sequence | ATGATACAATTGTTGGTGTAGCGTTTATACACCAACAGTCAGATTTCGCGGAAACAGAAA
CGAAGAGAATACGAAGAGTATGGTTCCTGGTGATGCCTTCACGAAATATAGATGTATAAC
GGATATATTGTAGTTCTGGAAAGTGTTATTGACAAAGTTTATAGCTCAATCACGATCGTT
TG |
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| Species | Pyrus pyrifolia |
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| Publication | [view all] |
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| Contact | Toshiya Yamamoto
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| Comment | SNP position in sequence: 388 |
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Publications
| Year | Publication |
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| 2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00081 ID=JPsnpHou00081; Name=JPsnpHou00081; organism=Pyrus pyrifolia; type=genetic_marker; length=570bp
GATCGAAGCCTTCGAGTGACGCACAACCTGACTGTTTTTGGTGGCTGCGG
CCTTGTGCTCTCGGTCATCACTGGGCTATTTGGAATTAATGTTGATGGAA
TGCCGGGTGCAGATAACGCTCCATATGCCTTTGGTGTATTTTCAGCCATT
CTCATCTTTATAGGAACTGTACTGATTGCGGTCGGGCTGCTCTACCTTGG
GTTGAAAAACCGGTCACTGGAGAGCAAGTTGAAGTTAGAAAGTTGGAGCT
TCAAGAGTTGGTTAAGATGTTTCAGCACGAGGCAGAGAATCATGAAGTGG
TTCGTAAAAATGTGTCTCGCAACAGTCTACCGCCAACAGCCGGCGATGCT
TTCCTACGTGATGCAGATTATGTCATGATTCAGTGAGyATGATACAATTG
TTGGTGTAGCGTTTATACACCAACAGTCAGATTTCGCGGAAACAGAAACG
AAGAGAATACGAAGAGTATGGTTCCTGGTGATGCCTTCACGAAATATAGA
TGTATAACGGATATATTGTAGTTCTGGAAAGTGTTATTGACAAAGTTTAT
AGCTCAATCACGATCGTTTG
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